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# Data camp M2DS: single-cell type classification challenge

Starting kit for the `scMARK_classification` challenge: classification of cell-types with single-cell RNAseq count data.


# Setup
Run the following command in your prefered local repository

`git clone git@github.com:ramp-kits/scMARK_classification.git`

# Download OSF data

You can download the public data via the dedicated python script to be called as follow 

```bash
python download_data.py 
```


# Get started with the challenge

Open the jupyter notebook `scMARK_classification_starting_kit.ipynb` and follow the guide !
